Accounting & Bookkeeping

237 Tax Returns, 237 Deadlines, One Spreadsheet: Why Lodgement Tracking Breaks Every Tax Season

The ATO imposes automatic penalties for late lodgement. Your clients trust you to meet every deadline. And right now, your tracking system is a colour-coded spreadsheet that nobody updates consistently.

AK

Anna Kovacs

Financial Services Technologist

November 22, 2025 10 min read

It was 4:30 on a Friday afternoon in February when Rachel — senior accountant, eight years at the firm — walked into the principal’s office and said, “I think we missed the January 15 deadline for the Martin Group.”

The Martin Group had a December year-end. Their company tax return was due on the 15th of January under the lodgement program. Rachel had been waiting for their financial statements since November. She had sent two emails. The client’s bookkeeper had responded to neither. And somewhere between Christmas, New Year, and the January rush, the deadline had passed without the return being lodged or an extension being requested.

The FTL penalty was $330. The cost of explaining to the client — a $45,000 annual fee relationship — that their accountants had missed a deadline was considerably higher. Not in dollars, but in trust. The Martin Group’s CFO called the principal directly. “This is exactly the kind of thing we pay you to not let happen.”

She was right. And she was not the first client to say something like that.

The Lodgement Tracking Problem

ATO issues approximately 2.5 million Failure to Lodge (FTL) penalties annually across all entity types

ATO Annual Report / Compliance Data

Tax agents must maintain 85%+ on-time lodgement rate to retain lodgement program concessions

ATO Tax Agent Lodgement Program

60-70% of late lodgements are caused by clients not providing information on time, not by the accountant failing to prepare

Practice management survey data

Average small firm manages 200-400 individual lodgement deadlines per year across all entity types

CPA Australia Small Practice Survey

The mathematics of lodgement tracking are deceptively simple. Each client has a return type. Each return type has a due date. The firm must lodge each return by its due date. Simple.

Except that a firm with 150 clients does not have 150 deadlines. It has 300-400, because many clients have multiple obligations — individual returns, company returns, trust returns, BAS quarterly, IAS monthly, PAYG summaries, and superannuation guarantee charge statements. Each obligation has its own deadline. Many of those deadlines are different depending on whether the client has a June or non-standard year-end, whether they are in a tax payable or refund position, and whether the firm is on a standard or deferred lodgement schedule.

A firm with 150 clients might manage 350 lodgement deadlines spread across twelve months. That is roughly thirty deadlines per month, or seven to eight per week. Every week, the firm needs to ensure that seven to eight returns are either lodged or on track to be lodged before their respective due dates.

When the tracking system is a spreadsheet updated manually by whoever remembers to update it, deadlines get missed. Not because the firm is incompetent. Because the volume is relentless and the consequences of a single oversight are disproportionate to the effort required to prevent it.

$3,300-$8,250

per year

Cost of FTL penalties for a firm that misses 10-25 lodgement deadlines per year — not including client relationship damage and potential loss of lodgement program concessions

Tax Lodgement Deadline Tracker

Build with

The Client Document Problem

Here is the uncomfortable truth about late lodgements: the firm almost always could have prepared and lodged the return on time if the client had provided their information when asked. The bottleneck is not the accountant. It is the client.

But the client does not see it that way. When the ATO issues a penalty for late lodgement, the client’s first instinct is to blame the accountant. “Isn’t it your job to make sure this gets done on time?” And technically, yes — the firm accepted the engagement, the firm is the registered tax agent, and the firm is responsible for managing the lodgement program.

This means the firm must manage the client as much as the return. And managing the client means systematic, documented follow-up that starts well before the deadline and escalates appropriately when the client does not respond.

The mistake most firms make is sending one email asking for documents and then waiting. The client does not respond. Three weeks pass. The deadline approaches. The accountant sends a rushed follow-up. The client finally responds, but there is not enough time to prepare the return. The deadline is missed.

The solution is a graduated follow-up sequence — automated, documented, and escalating — that removes the decision-making from the process. The system sends the emails. The accountant focuses on preparation. Nobody has to remember to chase anybody.

AspectManual ProcessWith Neudash
Document requestOne email sent when the accountant remembers, often too close to the deadlineStructured sequence at 60, 30, and 14 days before deadline with escalating urgency
Follow-up trackingAccountant checks email to see if client responded — might forget to follow upSystem tracks client response status and triggers next follow-up automatically
Internal escalationManager discovers overdue returns during a panicked review the week before deadlineAutomatic alerts at 21, 14, and 7 days before deadline based on preparation status
Lodgement rate trackingCalculated manually once a year when the ATO requests itReal-time on-time lodgement rate updated with every lodgement, visible at any time
Client accountabilityNo documentation of when documents were requested or how many timesComplete audit trail of every request sent, enabling the firm to demonstrate due diligence

Pro Tip

The most important email in your lodgement follow-up sequence is not the first request — it is the final warning at 14 days before deadline. This email should explicitly state that late lodgement may result in ATO penalties, and that those penalties are the client’s responsibility if documents are not provided within the specified timeframe. This is not aggressive — it is professional risk communication. And critically, it creates a documented record that the firm warned the client, which protects the firm if the client later disputes responsibility for a penalty. I recommend including: the specific deadline date, the specific documents still outstanding, the specific consequence of not providing them, and a clear action the client needs to take.

The Lodgement Program Risk

Beyond individual penalties, there is a systemic risk that most firm owners underestimate: losing lodgement program concessions.

The ATO’s lodgement program grants registered tax agents extended deadlines — in many cases, months beyond the standard 31 October due date for individual returns. These extensions are not automatic. They are conditional on the agent maintaining an acceptable on-time lodgement rate, generally above 85%.

If a firm’s lodgement rate drops below the ATO’s threshold, the consequences cascade. The firm may lose access to extended deadlines. Returns that were previously due in March or May under the lodgement program revert to the standard 31 October due date. Suddenly, the firm’s entire workflow is compressed. Returns that the team had months to prepare must now be completed by late October, creating an impossible bottleneck.

I have seen firms lose their lodgement program concessions. The recovery is painful — it takes twelve to eighteen months of perfect compliance to regain the extended deadlines. During that period, the firm is operating at a significant competitive disadvantage compared to firms that retained their concessions.

Tracking the on-time lodgement rate in real time — not annually, not when the ATO asks for it, but continuously — is the early warning system that prevents this scenario. If the rate starts trending below 90%, the firm can prioritize lodgement completion before the 85% threshold is breached.

The Preparation Bottleneck

Even when client documents arrive on time, the return still needs to be prepared, reviewed, and lodged. In most small firms, preparation is assigned informally — the principal or senior accountant distributes work based on who seems to have capacity, and the team member works through their pile in rough priority order.

The problem is that “rough priority order” does not account for deadline proximity. A return due in two weeks sits in the same pile as a return due in three months. The accountant works through them sequentially or based on complexity, not urgency. Deadlines approach without anyone noticing until the weekly (or monthly) deadline review.

Automated internal alerts solve this. At 21 days before a deadline, the assigned preparer receives a reminder. At 14 days, the manager is notified if work has not started. At 7 days, the principal receives an escalation. This graduated escalation ensures that no return sits unstarted within two weeks of its deadline — the scenario that leads to either rushed preparation (quality risk) or missed deadlines (penalty risk).

$15,000-$45,000

per year

Estimated revenue at risk if a firm loses ATO lodgement program concessions — additional staff time required to compress all returns into standard deadline windows, plus potential client losses from service disruption

What Changed for Rachel’s Firm

After the Martin Group incident, Rachel’s principal implemented automated lodgement tracking. The firm catalogued every client engagement with its lodgement deadline, assigned every return to a preparer, and built automated follow-up sequences for both client documents and internal preparation milestones.

The first quarter was revealing. The system surfaced twelve returns that were within 30 days of their deadline with no client documents received and no follow-up sent. Twelve potential Martin Group situations, avoided because the system flagged them before the deadline arrived.

Within six months, the firm’s on-time lodgement rate improved from 88% to 97%. Not because the team worked harder — they worked the same hours. Because the system ensured that the right work was prioritized at the right time, and clients were followed up before their delays became the firm’s problem.

Rachel told me the biggest change was psychological. “I used to carry a constant anxiety about whether we were missing something. A deadline that slipped through, a client we forgot to chase. Now the system tells me what needs attention. I do not have to hold it all in my head.”

That cognitive relief — the shift from anxiety to confidence — is worth as much as the penalty avoidance. Lodgement tracking is not glamorous work. But it is the work that protects the firm’s reputation, its lodgement program concessions, and its relationships with the clients who trust it to get this right every time.

Tools Referenced

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About Anna Kovacs

Financial Services Technologist

CPA turned fintech consultant. Spent a decade in Big 4 before realizing small firms needed the same tools at a fraction of the cost. Writes about making professional services more efficient.